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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914217.1_cds_XP_016464236.1_57293
CDS Infomation

[gene=LOC107787213] [db_xref=GeneID:107787213] [protein=2-oxoglutarate-dependent dioxygenase AOP3-like] [protein_id=XP_016464236.1] [location=join(39467..39849,40596..40938)] [gbkey=CDS]
Sequence

ATGAGTCATCAAACACCTCTAAGACTTCCTCTCTTGACCCTATCAAATCACTACTTGAAA
CCTAATACTTCTACTAATTGGTTCTCAGCATGTGATGAAGTCCGCCGTGCACTGGAAGAG
TACGGTTGTTTTCTGGCGGTTTACGATTCGGTTTCGCCGGAGCTAAATATTGATATATTT
CAAGCAGTAGAAGAATTGTTTGATCTTCCCACAGAATCCAAACTTCGTAACACTTCTGAA
AAACCCTTCTATGGGTACTATGGAAATATCTCTGATTTCCCTCTTCAAGAAAGCCTAGGG
ATTAATATTGGAGATGCAATAACTGCTGAAGGAGTTCAAAATTTTACAAGCCTCATGTGG
CCTACGGGAAATGACCACTTTAGTGAAATTATTCACGACTATGCAAACATAGTAGCTGAT
TTGGAGAAGATGGTGAAAAGGATGGTTATTGAGAGCTATGGAGTAGAAAATTGCTATGAT
TTTCTAGACAAATCAACAACTTATCTCCTTCGATTAATAAAGTATAGGACACCAAAATTG
GATGAATCAAATGTTGGGTCACAGGTTCACACTGATAAAACTTTCCTTAGCATACTTCAC
CAGAACCAAGTTAATGGTTTGGAAGTGAAGACTAAAGATGGTGAATGGATGGCTATTGAT
ATGACTCCTGCTAATTCCTTTCTTGTCATGGTAGGGGAAGCATTTTCGGTAAGTTTTCTA
TCTTGA

Peptide Sequence

PEP ID

XP_016464236.1
PEP Infomation

PREDICTED: 2-oxoglutarate-dependent dioxygenase AOP3-like [Nicotiana tabacum]
Sequence

MSHQTPLRLPLLTLSNHYLKPNTSTNWFSACDEVRRALEEYGCFLAVYDSVSPELNIDIF
QAVEELFDLPTESKLRNTSEKPFYGYYGNISDFPLQESLGINIGDAITAEGVQNFTSLMW
PTGNDHFSEIIHDYANIVADLEKMVKRMVIESYGVENCYDFLDKSTTYLLRLIKYRTPKL
DESNVGSQVHTDKTFLSILHQNQVNGLEVKTKDGEWMAIDMTPANSFLVMVGEAFSVSFL
S

Transcript Sequence

Gene sequence data has not been registered.